An ancient enzyme finds a new home: Prevalence and neofunctionalization of trypsin in marine phytoplankton

Trypsin is an ancient protease best known as a digestive enzyme in animals, and traditionally believed to be absent in plants and protists. However, our recent studies have revealed its wide presence and important roles in marine phytoplankton. Here, to gain a better understanding on the importance of trypsin in phytoplankton, we further surveyed the distribution, diversity, evolution and potential ecological roles of trypsin in global ocean phytoplankton. Our analysis indicated that trypsin is widely distributed both taxonomically and geographically in marine phytoplankton. Furthermore, by systematic comparative analyses we found that algal trypsin could be classified into two subfamilies (trypsin I and trypsin II) and exhibited highly duplicated and diversified during evolution. We also observed markedly different domain sequences and organizations between and within the subfamilies, suggesting potential neofunctionalization. Diatoms contain both subfamilies of trypsin, with higher numbers of genes and more environment-responsive expression of trypsin than other lineages. The duplication and subsequent neofunctionalization of the trypsin family may be important in diatoms for adapting to dynamical environmental conditions, contributing to diatoms' dominance in the coastal oceans. This work advances our knowledge on the distribution and neofunctionalization of this ancient enzyme and creates a new window of research on phytoplankton biology.     

几种海洋动物药中氨基酸的测定

本文报道了中药瓦楞子、蛤壳、贝齿、鱼脑石、鹅管石中的氨基酸分析,结果表明分别含有13～16种氨基酸,为全面深入地研究和开发这几种海洋动物药提供参考依据。     

人体β-珠蛋白基因5’旁侧调控元件与不同发育时期调控因子的相互作用

人β-珠蛋白基因主要在成年期的骨髓中表达,在胎儿肝,成年肝和K 562细胞中则处于关闭状态。凝胶电泳阻抑法分析发现,在人胎儿肝,成年肝及K 562细胞的核蛋白抽提物中存在着不同的与β-珠蛋白基因5'旁侧调控元件(-372到-194 bp)相结合的红系组织特异性的调控因子。竟争试验的结果表明,成年肝和K 562细胞中的调控因子与β-珠蛋白基因5'旁侧调控元件相互作用的方式具有一定的相似性,这两种细胞的调控因子既结合于负调控区(NCR 2)也结合于正调控区,说明两种细胞中β-珠蛋白基因的关闭机制可能是相似的。胎儿肝的核蛋白因子只结合于负调控区,推测在胎儿期存在独特的关闭机制。     

多元方差分析中的单一自由度独立比较

本文根据一元方差分析的单一自由度比较原理提出了多元方差分析中的单一自由度比较方法,以用于各种平衡试验设计中具多个变量的处理间多重比较．     

Physical map of the genome of Treponema pallidum subsp. pallidum (Nichols).

A physical map of the chromosome of Treponema pallidum subsp. pallidum (Nichols), the causative agent of syphilis, was constructed from restriction fragments produced by NotI, SfiI, and SrfI. These rare-cutting restriction endonucleases cleaved the T. pallidum genome into 16, 8, and 15 fragments, respectively. Summation of the physical lengths of the fragments indicates that the chromosome of T. pallidum subsp. pallidum is approximately 1,030 to 1,080 kbp in size. The physical map was constructed by hybridizing a variety of probes to Southern blots of single and double digests of T. pallidum genomic DNA separated by contour-clamped homogeneous electric field electrophoresis. Probes included cosmid clones constructed from T. pallidum subsp. pallidum genomic DNA, restriction fragments excised from gels, and selected genes. Physical mapping confirmed that the chromosome of T. pallidum subsp. pallidum is circular, as the SfiI and SrfI maps formed complete circles. A total of 13 genes, including those encoding five membrane lipoproteins (tpn47, tpn41, tpn29-35, tpn17, and tpn15), a putative outer membrane porin (tpn50), the flagellar sheath and hook proteins (flaA and flgE), the cytoplasmic filament protein (cfpA), 16S rRNA (rrnA), a major sigma factor (rpoD), and a homolog of cysteinyl-tRNA synthetase (cysS), have been localized in the physical map as a first step toward studying the genetic organization of this noncultivable pathogen.     

Trypsin and forskolin decrease the sensitivity of L-type calcium current to inhibition by cytoplasmic free calcium in guinea pig heart muscle cells.

A key feature of trypsin action on ionic membrane currents including L-type Ca2+ current (ICa) is the removal of inactivation upon intracellular application. Here we report that trypsin also occludes the resting cytoplasmic free Ca2+ ([Ca2+]i)-induced inhibition of peak ICa in isolated guinea pig ventricular cardiomyocytes, using the whole-cell patch clamp in combination with the Fura-2 ratio-fluorescence technique. The effectiveness of trypsin to guard ICa against [Ca2+]i-induced inhibition was compared with that of forskolin, as cAMP-dependent phosphorylation had been suggested to confer protection against [Ca2+]i-induced inactivation. Intracellular dialysis of trypsin (1 mg/ml) augmented ICa by 7.2-fold, significantly larger than the threefold increase induced by forskolin (3 microM). Forskolin application after trypsin dialysis did not further enhance ICa. An increase in [Ca2+]i from resting levels (varied by 0.2, 10, and 40 mM EGTA dialysis) to submicromolar concentrations after replacement of external Na+ (Na(o)+) with tetraethylammonium (TEA+) resulted in monotonic inhibition of control ICa, elicited from a holding potential of -40 mV at 22 degrees C. AFter trypsin dialysis, however, ICa became less sensitive to submicromolar [Ca2+]i; the [Ca2+]i of half-maximal inhibition (K0.5, normally around 60 nM) increased by approximately 20-fold. Forskolin also increased the K0.5 by approximately threefold. These and accompanying kinetic data on ICa decay are compatible with a model in which it is assumed that Ca2+ channels can exist in two modes (a high open probability "willing" and a low open probability "reluctant" mode) that are in equilibrium with one another. An increase in [Ca2+]i places a larger fraction of channels in the reluctant mode. This interconversion is hindered by cAMP-dependent phosphorylation and becomes nearly impossible after tryptic digestion.     

四川地区幼儿和学龄前儿童的鼻部测量

本文报告１１１６例四川地区幼儿和学龄前儿童（２－７岁）鼻部９项指标的测量均数,性差及年龄发育特点。性差：仅鼻凹鼻底距４－６．５岁等少数指标部分年龄段男女性间出现显著性划异（男＞女）。此外各项指标的绝大多数年龄段男女性间无显著性差异。年龄发育：９项测量指标中７项的生长曲线随年产长而上升,数值随年龄增大,并有１－２个发育高峰;提示鼻部发育具有阶段性;２项指标的曲线随年龄增长变化较小。４项指标男女性的曲     

粪产碱菌(Alcaligenes faecalix)基因文库的构建和nifH基因同源顺序的克隆

采用λ噬菌体置换型载体EMBL4,构建了Alcaligenes faecalis A-15 H1菌株总DNA的基因文库。用Sau3AⅠ限制酶完成部分酶切,取13—20kb大小的片段进行克隆。载体DNA经BamHⅠ和SaiⅠ完全双酶切,左右臂“退火”形成左右臂载体分子后再与外源片段连接。左右臂载体分子与外源片段按照1:1的分子比进行体外连接。用E.coli BHB2688和E.coli BHB2690制备的包装抽提物进行体外包装,所得基因文库效价测定为1.2×10~6 pfu,远远超过理论上所需的库容量。以nif H基因作为探针,经3轮噬菌斑原位杂交,从基因文库中筛选出含有其同源顺序的克隆,并得到了梯度点杂交的验证。对所得重组噬菌体克隆之一进行Southern转移杂交,结果证实,其3.5kb的EcoRⅠ酶切片段为nif H阳性杂交条带。将其克隆到质粒pUC19 DNA上后,转入受体菌JM101中。再次经Southern转移杂交,证明所得重组质粒克隆(pAFH)含有粪产碱菌中的与nifH基因有同源顺序的片段。     

db—cAMP对转化细胞钙调素基因表达与细胞骨架的影响

We have demonstrated that the distribution of microtubules (MT), microfilaments (MF) and fibronectin (FN) were diminished, while the gene expression of the calmodulin and c-fos enhanced in the transformed C3 H10 T1/2 cells. After treatment with 1 mM db-cAMP for 1 hr. and 2 hrs., there was an early and rapidly reduced in gene expression of calmodulin and c-fos respectively. After db-cAMP treatment for 4-5 days, the number of Capping cells of ConA binding decreased significantly and the cell surface microvilli decreased also. The growth of treated cells was inhibited markedly. By using 4F1 cDNA probe, which is preferentially expressed in G1 phase, we have found that the db-cAMP treated cells were accumulated at G1 phase. Of particular interest is the fact that the distribution of microtubules, microfilaments and fibronectin were recovered after treatment with 1 mM db-cAMP for 6 days. It is suggested that the inhibition of proliferation, alteration of phenotype and recovery of cytoskeleton in transformed cells after treatment with db-cAMP are related to the inhibition of gene expression of calmodulin.